PDX Model DetailsTM00135

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PDX Model Summary

Model Details

Model ID (Previous ID)
TM00135 (CN1187F)
Initial Diagnosis
Adenocarcinoma
Final Diagnosis
Adenocarcinoma
Stage/Grade
AJCC IV / Grade:3
Primary Site
Colon
Sample Site
Peritoneum
Tumor Type
Metastatic

Patient

Sex
Male
Age (at time of tissue collection)
67
Race/Ethnicity
White / Not Reported
Treatment Naïve?
Yes
Current Smoker/Former Smoker
Unknown / Yes

Engraftment

Host Strain
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ
(aka NSG or NOD Scid gamma)
Sample Type
Surgical resection (fragment)
Engraftment Site
no data

Molecular Data (Engrafted Tumor)

Variants

Gene Expression

Platforms: hu133

Gene CNV

CNV Plots

Tumor Mutation Burden

no data

Microsatellite Instability

no data

Gene Fusion

no data

Model Characterization

Histology

Summary:
P0, P1 pathology consistent with adenocarcinoma.
Pathologist:
Dr. Regina Gandour-Edwards, University of California, Davis

Patient tumor for PDX model TM00135 stained for H&E.

P0 tumor #1875 for PDX model TM00135.

P0 tumor F1875 for PDX model TM00135 stained for H&E.

P0 tumor F1875 for PDX model TM00135 stained for AE1AE3. Staining was positive.

P0 tumor F1875 for PDX model TM00135 stained for CD45. Staining was negative.

P0 tumor F1875 for PDX model TM00135 stained for Ki67. Staining was positive.

P1 tumor F1875 ID007 for PDX model TM00135 stained for H&E.

P1 tumor F1875 ID007 for PDX model TM00135 stained for AE1AE3. Staining was positive.

P1 tumor F1875 ID007 for PDX model TM00135 stained for CD45. Staining was negative.

P1 tumor F1875 ID007 for PDX model TM00135 stained for Ki67. Staining was positive.

Dosing Studies

no data

Circos Plots


Circos plot for P0 tumor # 874 from PDX model TM00135 (aka, CN1187F)